Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxd8P23463 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxd8P23463 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Hoxd8P23463 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hoxd8P23463 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Hoxd8P23463 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxd8P23463 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hoxd8P23463 Gm649-201ENSMUST00000117284 1054 ntBASIC12.32□□□□□ -0.44
Hoxd8P23463 Gm15615-201ENSMUST00000118876 198 ntBASIC12.32□□□□□ -0.44
Hoxd8P23463 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.32□□□□□ -0.44
Hoxd8P23463 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.32□□□□□ -0.44
Hoxd8P23463 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Gm23757-201ENSMUST00000158353 100 ntBASIC12.32□□□□□ -0.44
Hoxd8P23463 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Mir6923-201ENSMUST00000184592 72 ntBASIC12.32□□□□□ -0.44
Hoxd8P23463 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.32□□□□□ -0.44
Hoxd8P23463 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Gm43778-201ENSMUST00000199438 199 ntBASIC12.32□□□□□ -0.44
Hoxd8P23463 Gm44315-201ENSMUST00000203041 219 ntBASIC12.32□□□□□ -0.44
Hoxd8P23463 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC12.32□□□□□ -0.44
Hoxd8P23463 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.32□□□□□ -0.44
Hoxd8P23463 Gm9520-201ENSMUST00000209460 1253 ntBASIC12.32□□□□□ -0.44
Hoxd8P23463 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Hoxd8P23463 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.32□□□□□ -0.44
Hoxd8P23463 AC125539.1-202ENSMUST00000226449 670 ntBASIC12.32□□□□□ -0.44
Hoxd8P23463 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Gm4978-201ENSMUST00000071565 801 ntBASIC12.32□□□□□ -0.44
Hoxd8P23463 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hoxd8P23463 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxd8P23463 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Hoxd8P23463 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hoxd8P23463 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxd8P23463 Gm42535-201ENSMUST00000197312 1399 ntBASIC12.31□□□□□ -0.44
Hoxd8P23463 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.31□□□□□ -0.44
Hoxd8P23463 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Gm26013-201ENSMUST00000104404 119 ntBASIC12.31□□□□□ -0.44
Hoxd8P23463 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Hoxd8P23463 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.31□□□□□ -0.44
Hoxd8P23463 Gm14776-201ENSMUST00000121029 887 ntBASIC12.31□□□□□ -0.44
Hoxd8P23463 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.31□□□□□ -0.44
Hoxd8P23463 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.31□□□□□ -0.44
Hoxd8P23463 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Gm5621-201ENSMUST00000187303 640 ntBASIC12.31□□□□□ -0.44
Hoxd8P23463 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxd8P23463 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Gm45856-201ENSMUST00000212752 416 ntBASIC12.31□□□□□ -0.44
Hoxd8P23463 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hoxd8P23463 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxd8P23463 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxd8P23463 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.31□□□□□ -0.44
Hoxd8P23463 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hoxd8P23463 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hoxd8P23463 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hoxd8P23463 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxd8P23463 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.31□□□□□ -0.44
Hoxd8P23463 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hoxd8P23463 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hoxd8P23463 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hoxd8P23463 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxd8P23463 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms