Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Chrna4O70174 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Chrna4O70174 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12□□□□□ -0.49
Chrna4O70174 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12□□□□□ -0.49
Chrna4O70174 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12□□□□□ -0.49
Chrna4O70174 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Chrna4O70174 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Gm27627-201ENSMUST00000183644 150 ntBASIC12□□□□□ -0.49
Chrna4O70174 Gm29615-201ENSMUST00000185371 697 ntBASIC12□□□□□ -0.49
Chrna4O70174 Gm28224-201ENSMUST00000186078 697 ntBASIC12□□□□□ -0.49
Chrna4O70174 Gm29001-201ENSMUST00000186177 697 ntBASIC12□□□□□ -0.49
Chrna4O70174 Gm28292-201ENSMUST00000186593 697 ntBASIC12□□□□□ -0.49
Chrna4O70174 Gm28101-201ENSMUST00000187608 697 ntBASIC12□□□□□ -0.49
Chrna4O70174 Gm29076-201ENSMUST00000187689 697 ntBASIC12□□□□□ -0.49
Chrna4O70174 Gm28302-201ENSMUST00000187931 697 ntBASIC12□□□□□ -0.49
Chrna4O70174 Gm28646-201ENSMUST00000188220 697 ntBASIC12□□□□□ -0.49
Chrna4O70174 Gm28205-201ENSMUST00000189177 697 ntBASIC12□□□□□ -0.49
Chrna4O70174 Gm29032-201ENSMUST00000189797 697 ntBASIC12□□□□□ -0.49
Chrna4O70174 Gm28695-201ENSMUST00000190300 697 ntBASIC12□□□□□ -0.49
Chrna4O70174 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Gm37448-201ENSMUST00000192795 697 ntBASIC12□□□□□ -0.49
Chrna4O70174 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Gm19287-201ENSMUST00000203190 358 ntBASIC12□□□□□ -0.49
Chrna4O70174 Gm17827-201ENSMUST00000211825 742 ntBASIC12□□□□□ -0.49
Chrna4O70174 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12□□□□□ -0.49
Chrna4O70174 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Gm5525-201ENSMUST00000190438 1312 ntBASIC12□□□□□ -0.49
Chrna4O70174 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Chrna4O70174 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Chrna4O70174 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12□□□□□ -0.49
Chrna4O70174 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12□□□□□ -0.49
Chrna4O70174 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Chrna4O70174 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Chrna4O70174 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Chrna4O70174 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.99□□□□□ -0.49
Chrna4O70174 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Chrna4O70174 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Chrna4O70174 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Chrna4O70174 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Chrna4O70174 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.99□□□□□ -0.49
Chrna4O70174 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.99□□□□□ -0.49
Chrna4O70174 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Chrna4O70174 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.99□□□□□ -0.49
Chrna4O70174 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.99□□□□□ -0.49
Chrna4O70174 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.99□□□□□ -0.49
Chrna4O70174 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.99□□□□□ -0.49
Chrna4O70174 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.99□□□□□ -0.49
Chrna4O70174 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.99□□□□□ -0.49
Chrna4O70174 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Chrna4O70174 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Chrna4O70174 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.99□□□□□ -0.49
Chrna4O70174 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.99□□□□□ -0.49
Chrna4O70174 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.99□□□□□ -0.49
Chrna4O70174 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.99□□□□□ -0.49
Chrna4O70174 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chrna4O70174 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms