Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 AC166836.1-201ENSMUST00000219933 1795 ntBASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb5Q91XZ5 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb5Q91XZ5 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Pcdhb5Q91XZ5 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pcdhb5Q91XZ5 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.02□□□□□ -0.16
Pcdhb5Q91XZ5 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Pcdhb5Q91XZ5 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.02□□□□□ -0.16
Pcdhb5Q91XZ5 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.02□□□□□ -0.16
Pcdhb5Q91XZ5 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb5Q91XZ5 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb5Q91XZ5 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb5Q91XZ5 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb5Q91XZ5 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb5Q91XZ5 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb5Q91XZ5 Gm9192-201ENSMUST00000183221 985 ntBASIC14.02□□□□□ -0.17
Pcdhb5Q91XZ5 Mir6998-201ENSMUST00000183343 64 ntBASIC14.02□□□□□ -0.17
Pcdhb5Q91XZ5 Gm29155-201ENSMUST00000185910 269 ntBASIC14.02□□□□□ -0.17
Pcdhb5Q91XZ5 Gm42518-201ENSMUST00000196277 938 ntBASIC14.02□□□□□ -0.17
Pcdhb5Q91XZ5 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC14.02□□□□□ -0.17
Pcdhb5Q91XZ5 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb5Q91XZ5 AC165260.2-203ENSMUST00000224237 336 ntBASIC14.02□□□□□ -0.17
Pcdhb5Q91XZ5 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb5Q91XZ5 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb5Q91XZ5 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.02□□□□□ -0.17
Pcdhb5Q91XZ5 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb5Q91XZ5 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb5Q91XZ5 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Pcdhb5Q91XZ5 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb5Q91XZ5 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb5Q91XZ5 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Gm4879-201ENSMUST00000122190 1272 ntBASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Gm26047-201ENSMUST00000157308 113 ntBASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Gm17877-201ENSMUST00000192578 814 ntBASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Gm37905-201ENSMUST00000195310 341 ntBASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Gm26047-202ENSMUST00000198840 115 ntBASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Gm42657-201ENSMUST00000201746 211 ntBASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Gm9661-201ENSMUST00000221611 1122 ntBASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb5Q91XZ5 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb5Q91XZ5 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb5Q91XZ5 Gm45199-201ENSMUST00000207640 1507 ntBASIC14□□□□□ -0.17
Pcdhb5Q91XZ5 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC14□□□□□ -0.17
Pcdhb5Q91XZ5 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms