Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Gm16570-201ENSMUST00000161951 436 ntBASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Gzmn-202ENSMUST00000225535 989 ntBASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Gm23912-201ENSMUST00000104687 87 ntBASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Gm42937-201ENSMUST00000197360 752 ntBASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.8□□□□□ -0.52
Pcdhga4Q91XY4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga4Q91XY4 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms