Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Usp3Q91W36 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Usp3Q91W36 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.43□□□□□ -0.42
Usp3Q91W36 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.43□□□□□ -0.42
Usp3Q91W36 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Usp3Q91W36 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Usp3Q91W36 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp3Q91W36 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.42□□□□□ -0.42
Usp3Q91W36 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.42□□□□□ -0.42
Usp3Q91W36 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Usp3Q91W36 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Gm14938-201ENSMUST00000119482 943 ntBASIC12.42□□□□□ -0.42
Usp3Q91W36 Gm15610-201ENSMUST00000120584 195 ntBASIC12.42□□□□□ -0.42
Usp3Q91W36 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.42□□□□□ -0.42
Usp3Q91W36 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.42□□□□□ -0.42
Usp3Q91W36 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Mir7677-201ENSMUST00000184226 67 ntBASIC12.42□□□□□ -0.42
Usp3Q91W36 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Gm9136-201ENSMUST00000193368 454 ntBASIC12.42□□□□□ -0.42
Usp3Q91W36 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp3Q91W36 Gm42696-201ENSMUST00000199859 1142 ntBASIC12.42□□□□□ -0.42
Usp3Q91W36 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Usp3Q91W36 Gm19208-201ENSMUST00000213861 912 ntBASIC12.42□□□□□ -0.42
Usp3Q91W36 AC133598.4-201ENSMUST00000224577 454 ntBASIC12.42□□□□□ -0.42
Usp3Q91W36 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.42□□□□□ -0.42
Usp3Q91W36 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.42□□□□□ -0.42
Usp3Q91W36 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Usp3Q91W36 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Usp3Q91W36 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Usp3Q91W36 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp3Q91W36 Gm38325-201ENSMUST00000194507 1377 ntBASIC12.42□□□□□ -0.42
Usp3Q91W36 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Usp3Q91W36 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Usp3Q91W36 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.41□□□□□ -0.42
Usp3Q91W36 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.41□□□□□ -0.42
Usp3Q91W36 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Usp3Q91W36 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Usp3Q91W36 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp3Q91W36 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Usp3Q91W36 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Gm1866-201ENSMUST00000120701 477 ntBASIC12.41□□□□□ -0.42
Usp3Q91W36 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.41□□□□□ -0.42
Usp3Q91W36 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Usp3Q91W36 Mir5120-201ENSMUST00000175020 78 ntBASIC12.41□□□□□ -0.42
Usp3Q91W36 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
Usp3Q91W36 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Usp3Q91W36 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms