Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Mir1905-201ENSMUST00000122779 82 ntBASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Gm18558-201ENSMUST00000186253 1214 ntBASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Gm17796-201ENSMUST00000189015 1213 ntBASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 CT573047.1-201ENSMUST00000223652 851 ntBASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx54Q8K4L0 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Gm3329-201ENSMUST00000159873 556 ntBASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Gm37197-201ENSMUST00000195607 401 ntBASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 CT010506.1-201ENSMUST00000223673 349 ntBASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx54Q8K4L0 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 AC162932.1-201ENSMUST00000219209 872 ntBASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 AC118639.2-201ENSMUST00000226289 223 ntBASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 AC174797.1-201ENSMUST00000224339 1649 ntBASIC15.52■□□□□ 0.08
Ddx54Q8K4L0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx54Q8K4L0 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Ddx54Q8K4L0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx54Q8K4L0 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx54Q8K4L0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx54Q8K4L0 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx54Q8K4L0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx54Q8K4L0 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx54Q8K4L0 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx54Q8K4L0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx54Q8K4L0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
Ddx54Q8K4L0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms