Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Gm11660-201ENSMUST00000120955 412 ntBASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Gm11960-201ENSMUST00000122068 925 ntBASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Gm38314-201ENSMUST00000195709 625 ntBASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Gm44262-201ENSMUST00000204969 372 ntBASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Gm17827-201ENSMUST00000211825 742 ntBASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim9Q8C7M3 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Gm11700-201ENSMUST00000119409 403 ntBASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Gm8343-201ENSMUST00000182705 994 ntBASIC13.12□□□□□ -0.31
Trim9Q8C7M3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.12□□□□□ -0.31
Trim9Q8C7M3 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim9Q8C7M3 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gm11509-201ENSMUST00000117358 325 ntBASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gm26083-201ENSMUST00000157904 193 ntBASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gm27627-201ENSMUST00000183644 150 ntBASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gm29615-201ENSMUST00000185371 697 ntBASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gm28224-201ENSMUST00000186078 697 ntBASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gm29001-201ENSMUST00000186177 697 ntBASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gm28292-201ENSMUST00000186593 697 ntBASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gm28101-201ENSMUST00000187608 697 ntBASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gm29076-201ENSMUST00000187689 697 ntBASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gm28302-201ENSMUST00000187931 697 ntBASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gm28646-201ENSMUST00000188220 697 ntBASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gm28205-201ENSMUST00000189177 697 ntBASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gm29032-201ENSMUST00000189797 697 ntBASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gm28695-201ENSMUST00000190300 697 ntBASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms