Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Gm44551-201ENSMUST00000208804 171 ntBASIC12.7□□□□□ -0.38
Shroom1Q5SX79 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Gm5705-201ENSMUST00000066241 711 ntBASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Gm10288-201ENSMUST00000084614 537 ntBASIC12.7□□□□□ -0.38
Shroom1Q5SX79 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.7□□□□□ -0.38
Shroom1Q5SX79 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Paupar-201ENSMUST00000194826 3482 ntBASIC12.7□□□□□ -0.38
Shroom1Q5SX79 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Gm13809-201ENSMUST00000117921 597 ntBASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Gm15881-201ENSMUST00000148792 942 ntBASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Gm17391-201ENSMUST00000171036 126 ntBASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Gm19459-201ENSMUST00000176240 835 ntBASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Mir7032-201ENSMUST00000185154 79 ntBASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Gm37246-201ENSMUST00000192665 835 ntBASIC12.69□□□□□ -0.38
Shroom1Q5SX79 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Gm44545-201ENSMUST00000208262 746 ntBASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Gm8285-201ENSMUST00000208293 759 ntBASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.69□□□□□ -0.38
Shroom1Q5SX79 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.69□□□□□ -0.38
Shroom1Q5SX79 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Mir6546-201ENSMUST00000184460 62 ntBASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Mir7686-201ENSMUST00000200604 57 ntBASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Gm44126-201ENSMUST00000204831 514 ntBASIC12.68□□□□□ -0.38
Shroom1Q5SX79 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.68□□□□□ -0.38
Shroom1Q5SX79 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms