Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Gm3793-201ENSMUST00000204973 672 ntBASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Gm7940-201ENSMUST00000218195 769 ntBASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.55□□□□□ -0.4
Upf3aQ3ULJ3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Gm9136-201ENSMUST00000193368 454 ntBASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Olfr584-201ENSMUST00000098210 964 ntBASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upf3aQ3ULJ3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upf3aQ3ULJ3 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms