Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cntn3Q07409 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cntn3Q07409 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cntn3Q07409 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.52□□□□□ -0.4
Cntn3Q07409 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cntn3Q07409 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn3Q07409 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Cntn3Q07409 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn3Q07409 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.52□□□□□ -0.41
Cntn3Q07409 Gm9062-201ENSMUST00000117712 727 ntBASIC12.52□□□□□ -0.41
Cntn3Q07409 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.52□□□□□ -0.41
Cntn3Q07409 Gm5419-201ENSMUST00000119301 527 ntBASIC12.52□□□□□ -0.41
Cntn3Q07409 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.52□□□□□ -0.41
Cntn3Q07409 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.52□□□□□ -0.41
Cntn3Q07409 Gm22902-201ENSMUST00000158488 302 ntBASIC12.52□□□□□ -0.41
Cntn3Q07409 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn3Q07409 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.52□□□□□ -0.41
Cntn3Q07409 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.52□□□□□ -0.41
Cntn3Q07409 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC12.52□□□□□ -0.41
Cntn3Q07409 AC132260.2-201ENSMUST00000224482 344 ntBASIC12.52□□□□□ -0.41
Cntn3Q07409 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn3Q07409 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn3Q07409 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn3Q07409 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Cntn3Q07409 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn3Q07409 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn3Q07409 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn3Q07409 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn3Q07409 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn3Q07409 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn3Q07409 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn3Q07409 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn3Q07409 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn3Q07409 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn3Q07409 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn3Q07409 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.52□□□□□ -0.41
Cntn3Q07409 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cntn3Q07409 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.51□□□□□ -0.41
Cntn3Q07409 Gm43339-201ENSMUST00000200032 1606 ntBASIC12.51□□□□□ -0.41
Cntn3Q07409 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Cntn3Q07409 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Cntn3Q07409 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.51□□□□□ -0.41
Cntn3Q07409 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cntn3Q07409 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Gm11509-201ENSMUST00000117358 325 ntBASIC12.51□□□□□ -0.41
Cntn3Q07409 Gm11941-201ENSMUST00000119904 610 ntBASIC12.51□□□□□ -0.41
Cntn3Q07409 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Cntn3Q07409 Gm23699-201ENSMUST00000158835 135 ntBASIC12.51□□□□□ -0.41
Cntn3Q07409 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.51□□□□□ -0.41
Cntn3Q07409 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.51□□□□□ -0.41
Cntn3Q07409 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.51□□□□□ -0.41
Cntn3Q07409 Gm4482-201ENSMUST00000200876 742 ntBASIC12.51□□□□□ -0.41
Cntn3Q07409 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.51□□□□□ -0.41
Cntn3Q07409 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.51□□□□□ -0.41
Cntn3Q07409 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.51□□□□□ -0.41
Cntn3Q07409 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Cntn3Q07409 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.51□□□□□ -0.41
Cntn3Q07409 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cntn3Q07409 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.5□□□□□ -0.41
Cntn3Q07409 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.5□□□□□ -0.41
Cntn3Q07409 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cntn3Q07409 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cntn3Q07409 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cntn3Q07409 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cntn3Q07409 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cntn3Q07409 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cntn3Q07409 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cntn3Q07409 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cntn3Q07409 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cntn3Q07409 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cntn3Q07409 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.5□□□□□ -0.41
Cntn3Q07409 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.5□□□□□ -0.41
Cntn3Q07409 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.5□□□□□ -0.41
Cntn3Q07409 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.5□□□□□ -0.41
Cntn3Q07409 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cntn3Q07409 Gm9555-201ENSMUST00000200908 583 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms