Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfc1P35601 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfc1P35601 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Rfc1P35601 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rfc1P35601 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfc1P35601 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rfc1P35601 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.57□□□□□ -0.4
Rfc1P35601 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfc1P35601 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.57□□□□□ -0.4
Rfc1P35601 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfc1P35601 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfc1P35601 Gm11637-201ENSMUST00000120601 592 ntBASIC12.57□□□□□ -0.4
Rfc1P35601 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.57□□□□□ -0.4
Rfc1P35601 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rfc1P35601 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.57□□□□□ -0.4
Rfc1P35601 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.57□□□□□ -0.4
Rfc1P35601 Gm27486-201ENSMUST00000184923 80 ntBASIC12.57□□□□□ -0.4
Rfc1P35601 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.57□□□□□ -0.4
Rfc1P35601 Gm37042-201ENSMUST00000193816 581 ntBASIC12.57□□□□□ -0.4
Rfc1P35601 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.57□□□□□ -0.4
Rfc1P35601 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.57□□□□□ -0.4
Rfc1P35601 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Rfc1P35601 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.57□□□□□ -0.4
Rfc1P35601 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Rfc1P35601 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rfc1P35601 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rfc1P35601 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Rfc1P35601 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfc1P35601 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfc1P35601 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfc1P35601 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rfc1P35601 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfc1P35601 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfc1P35601 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Rfc1P35601 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.57□□□□□ -0.4
Rfc1P35601 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfc1P35601 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rfc1P35601 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.56□□□□□ -0.4
Rfc1P35601 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfc1P35601 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfc1P35601 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfc1P35601 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfc1P35601 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfc1P35601 Snord83b-201ENSMUST00000104546 94 ntBASIC12.56□□□□□ -0.4
Rfc1P35601 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.56□□□□□ -0.4
Rfc1P35601 Gm2231-201ENSMUST00000125661 612 ntBASIC12.56□□□□□ -0.4
Rfc1P35601 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Rfc1P35601 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.56□□□□□ -0.4
Rfc1P35601 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.56□□□□□ -0.4
Rfc1P35601 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.56□□□□□ -0.4
Rfc1P35601 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.56□□□□□ -0.4
Rfc1P35601 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfc1P35601 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfc1P35601 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfc1P35601 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rfc1P35601 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rfc1P35601 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfc1P35601 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rfc1P35601 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfc1P35601 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfc1P35601 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.56□□□□□ -0.4
Rfc1P35601 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfc1P35601 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
Rfc1P35601 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfc1P35601 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfc1P35601 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfc1P35601 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfc1P35601 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC12.56□□□□□ -0.4
Rfc1P35601 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfc1P35601 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rfc1P35601 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rfc1P35601 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rfc1P35601 Gm45161-201ENSMUST00000207316 2263 ntBASIC12.55□□□□□ -0.4
Rfc1P35601 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfc1P35601 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfc1P35601 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.55□□□□□ -0.4
Rfc1P35601 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfc1P35601 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.55□□□□□ -0.4
Rfc1P35601 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.55□□□□□ -0.4
Rfc1P35601 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rfc1P35601 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rfc1P35601 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfc1P35601 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.55□□□□□ -0.4
Rfc1P35601 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rfc1P35601 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfc1P35601 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfc1P35601 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rfc1P35601 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rfc1P35601 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rfc1P35601 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.55□□□□□ -0.4
Rfc1P35601 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.55□□□□□ -0.4
Rfc1P35601 Gm12384-201ENSMUST00000119228 919 ntBASIC12.55□□□□□ -0.4
Rfc1P35601 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.55□□□□□ -0.4
Rfc1P35601 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rfc1P35601 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rfc1P35601 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rfc1P35601 Gm22331-201ENSMUST00000158066 136 ntBASIC12.55□□□□□ -0.4
Rfc1P35601 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.55□□□□□ -0.4
Rfc1P35601 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.55□□□□□ -0.4
Rfc1P35601 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms