Protein–RNA interactions for Protein: P28028

Braf, Serine/threonine-protein kinase B-raf, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BrafP28028 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
BrafP28028 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
BrafP28028 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
BrafP28028 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.7□□□□□ -0.54
BrafP28028 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BrafP28028 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.69□□□□□ -0.54
BrafP28028 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.69□□□□□ -0.54
BrafP28028 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BrafP28028 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.69□□□□□ -0.54
BrafP28028 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BrafP28028 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.69□□□□□ -0.54
BrafP28028 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
BrafP28028 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BrafP28028 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
BrafP28028 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.69□□□□□ -0.54
BrafP28028 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
BrafP28028 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
BrafP28028 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
BrafP28028 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BrafP28028 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
BrafP28028 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
BrafP28028 Gm13875-201ENSMUST00000120162 282 ntBASIC11.69□□□□□ -0.54
BrafP28028 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.69□□□□□ -0.54
BrafP28028 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.69□□□□□ -0.54
BrafP28028 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
BrafP28028 Gm23119-201ENSMUST00000158610 140 ntBASIC11.69□□□□□ -0.54
BrafP28028 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.69□□□□□ -0.54
BrafP28028 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
BrafP28028 Gm26956-201ENSMUST00000182176 986 ntBASIC11.69□□□□□ -0.54
BrafP28028 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.69□□□□□ -0.54
BrafP28028 Gm18054-201ENSMUST00000207539 555 ntBASIC11.69□□□□□ -0.54
BrafP28028 Gm18935-201ENSMUST00000212692 664 ntBASIC11.69□□□□□ -0.54
BrafP28028 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.69□□□□□ -0.54
BrafP28028 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.69□□□□□ -0.54
BrafP28028 Gm7046-201ENSMUST00000221351 977 ntBASIC11.69□□□□□ -0.54
BrafP28028 Gm9823-201ENSMUST00000051212 327 ntBASIC11.69□□□□□ -0.54
BrafP28028 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
BrafP28028 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
BrafP28028 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
BrafP28028 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BrafP28028 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
BrafP28028 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
BrafP28028 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BrafP28028 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BrafP28028 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
BrafP28028 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.69□□□□□ -0.54
BrafP28028 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
BrafP28028 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
BrafP28028 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BrafP28028 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
BrafP28028 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
BrafP28028 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
BrafP28028 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
BrafP28028 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
BrafP28028 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.68□□□□□ -0.54
BrafP28028 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
BrafP28028 Gm13392-201ENSMUST00000117708 150 ntBASIC11.68□□□□□ -0.54
BrafP28028 Gm13786-201ENSMUST00000122371 333 ntBASIC11.68□□□□□ -0.54
BrafP28028 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.68□□□□□ -0.54
BrafP28028 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.68□□□□□ -0.54
BrafP28028 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.68□□□□□ -0.54
BrafP28028 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
BrafP28028 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.68□□□□□ -0.54
BrafP28028 Gm38158-201ENSMUST00000194617 339 ntBASIC11.68□□□□□ -0.54
BrafP28028 Gm43118-201ENSMUST00000199149 775 ntBASIC11.68□□□□□ -0.54
BrafP28028 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.68□□□□□ -0.54
BrafP28028 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.68□□□□□ -0.54
BrafP28028 Morn2-202ENSMUST00000227729 656 ntBASIC11.68□□□□□ -0.54
BrafP28028 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.68□□□□□ -0.54
BrafP28028 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
BrafP28028 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
BrafP28028 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
BrafP28028 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.68□□□□□ -0.54
BrafP28028 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.68□□□□□ -0.54
BrafP28028 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
BrafP28028 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.68□□□□□ -0.54
BrafP28028 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
BrafP28028 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms