Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Sod1P08228 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sod1P08228 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Sod1P08228 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.15□□□□□ -0.63
Sod1P08228 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.15□□□□□ -0.63
Sod1P08228 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Sod1P08228 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Sod1P08228 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Sod1P08228 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC11.14□□□□□ -0.63
Sod1P08228 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sod1P08228 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sod1P08228 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sod1P08228 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sod1P08228 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sod1P08228 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sod1P08228 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sod1P08228 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sod1P08228 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sod1P08228 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sod1P08228 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sod1P08228 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sod1P08228 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sod1P08228 Gm14395-201ENSMUST00000120494 563 ntBASIC11.14□□□□□ -0.63
Sod1P08228 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.14□□□□□ -0.63
Sod1P08228 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.14□□□□□ -0.63
Sod1P08228 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sod1P08228 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sod1P08228 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.14□□□□□ -0.63
Sod1P08228 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.14□□□□□ -0.63
Sod1P08228 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.14□□□□□ -0.63
Sod1P08228 Gm27390-201ENSMUST00000184516 176 ntBASIC11.14□□□□□ -0.63
Sod1P08228 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.14□□□□□ -0.63
Sod1P08228 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.14□□□□□ -0.63
Sod1P08228 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.14□□□□□ -0.63
Sod1P08228 Gm5298-201ENSMUST00000201122 892 ntBASIC11.14□□□□□ -0.63
Sod1P08228 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.14□□□□□ -0.63
Sod1P08228 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Sod1P08228 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.14□□□□□ -0.63
Sod1P08228 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.14□□□□□ -0.63
Sod1P08228 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sod1P08228 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sod1P08228 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sod1P08228 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Sod1P08228 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sod1P08228 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.14□□□□□ -0.63
Sod1P08228 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sod1P08228 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sod1P08228 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sod1P08228 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sod1P08228 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.14□□□□□ -0.63
Sod1P08228 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.14□□□□□ -0.63
Sod1P08228 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sod1P08228 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sod1P08228 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Sod1P08228 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sod1P08228 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.14□□□□□ -0.63
Sod1P08228 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sod1P08228 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sod1P08228 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sod1P08228 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sod1P08228 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sod1P08228 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sod1P08228 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.13□□□□□ -0.63
Sod1P08228 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.13□□□□□ -0.63
Sod1P08228 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.13□□□□□ -0.63
Sod1P08228 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.13□□□□□ -0.63
Sod1P08228 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
Sod1P08228 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.13□□□□□ -0.63
Sod1P08228 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.13□□□□□ -0.63
Sod1P08228 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.13□□□□□ -0.63
Sod1P08228 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.13□□□□□ -0.63
Sod1P08228 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Sod1P08228 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.13□□□□□ -0.63
Sod1P08228 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.13□□□□□ -0.63
Sod1P08228 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sod1P08228 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.13□□□□□ -0.63
Sod1P08228 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Sod1P08228 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.13□□□□□ -0.63
Sod1P08228 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sod1P08228 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms