Protein–RNA interactions for Protein: P07309

Ttr, Transthyretin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TtrP07309 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TtrP07309 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TtrP07309 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TtrP07309 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
TtrP07309 Gm8522-201ENSMUST00000118416 1929 ntBASIC8.62□□□□□ -1.03
TtrP07309 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
TtrP07309 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
TtrP07309 Gm5912-201ENSMUST00000122282 1438 ntBASIC8.62□□□□□ -1.03
TtrP07309 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC8.62□□□□□ -1.03
TtrP07309 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
TtrP07309 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC8.62□□□□□ -1.03
TtrP07309 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
TtrP07309 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TtrP07309 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
TtrP07309 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
TtrP07309 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC8.61□□□□□ -1.03
TtrP07309 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
TtrP07309 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
TtrP07309 Gm37600-201ENSMUST00000193764 3292 ntBASIC8.61□□□□□ -1.03
TtrP07309 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
TtrP07309 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC8.61□□□□□ -1.03
TtrP07309 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Mir1894-201ENSMUST00000122802 81 ntBASIC8.61□□□□□ -1.03
TtrP07309 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC8.61□□□□□ -1.03
TtrP07309 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC8.61□□□□□ -1.03
TtrP07309 Gm5637-201ENSMUST00000153890 1119 ntBASIC8.61□□□□□ -1.03
TtrP07309 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Gm4271-201ENSMUST00000174444 973 ntBASIC8.61□□□□□ -1.03
TtrP07309 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC8.61□□□□□ -1.03
TtrP07309 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC8.61□□□□□ -1.03
TtrP07309 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
TtrP07309 Gm5356-201ENSMUST00000093326 615 ntBASIC8.61□□□□□ -1.03
TtrP07309 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
TtrP07309 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Gm37806-201ENSMUST00000194524 6387 ntBASIC8.61□□□□□ -1.03
TtrP07309 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 AC122197.2-201ENSMUST00000219196 1635 ntBASIC8.61□□□□□ -1.03
TtrP07309 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC8.61□□□□□ -1.03
TtrP07309 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
TtrP07309 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC8.61□□□□□ -1.03
TtrP07309 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TtrP07309 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
TtrP07309 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TtrP07309 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TtrP07309 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC8.6□□□□□ -1.03
TtrP07309 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
TtrP07309 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TtrP07309 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
TtrP07309 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
TtrP07309 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
TtrP07309 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
TtrP07309 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TtrP07309 Gm13050-201ENSMUST00000122149 1345 ntBASIC8.6□□□□□ -1.03
TtrP07309 Gm15991-202ENSMUST00000212123 3565 ntBASIC8.6□□□□□ -1.03
TtrP07309 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
TtrP07309 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
TtrP07309 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
TtrP07309 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TtrP07309 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TtrP07309 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TtrP07309 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
TtrP07309 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TtrP07309 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TtrP07309 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TtrP07309 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC8.6□□□□□ -1.03
TtrP07309 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TtrP07309 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC8.6□□□□□ -1.03
TtrP07309 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC8.6□□□□□ -1.03
TtrP07309 Gm22331-201ENSMUST00000158066 136 ntBASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms