Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Gm20482-202ENSMUST00000174729 825 ntBASIC12.26□□□□□ -0.45
Atf6F6VAN0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Gm18893-201ENSMUST00000198416 943 ntBASIC12.26□□□□□ -0.45
Atf6F6VAN0 Rprl1-202ENSMUST00000198476 238 ntBASIC12.26□□□□□ -0.45
Atf6F6VAN0 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.26□□□□□ -0.45
Atf6F6VAN0 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.26□□□□□ -0.45
Atf6F6VAN0 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.26□□□□□ -0.45
Atf6F6VAN0 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Olfr582-201ENSMUST00000098212 960 ntBASIC12.26□□□□□ -0.45
Atf6F6VAN0 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Atf6F6VAN0 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.25□□□□□ -0.45
Atf6F6VAN0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Gm7783-201ENSMUST00000204795 781 ntBASIC12.25□□□□□ -0.45
Atf6F6VAN0 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atf6F6VAN0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.25□□□□□ -0.45
Atf6F6VAN0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms