Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm18212-201ENSMUST00000211678 889 ntBASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Gm270-201ENSMUST00000223010 976 ntBASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Gm26448-201ENSMUST00000082446 203 ntBASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cpsf4lE9Q2N0 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Mir7677-201ENSMUST00000184226 67 ntBASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Gm18056-201ENSMUST00000207670 568 ntBASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Gm18061-201ENSMUST00000208350 562 ntBASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Gm18063-201ENSMUST00000208529 568 ntBASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Gm18052-201ENSMUST00000208750 559 ntBASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Gm9797-202ENSMUST00000218003 294 ntBASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cpsf4lE9Q2N0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cpsf4lE9Q2N0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cpsf4lE9Q2N0 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cpsf4lE9Q2N0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Cpsf4lE9Q2N0 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.07□□□□□ -0.8
Cpsf4lE9Q2N0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cpsf4lE9Q2N0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cpsf4lE9Q2N0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Cpsf4lE9Q2N0 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cpsf4lE9Q2N0 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cpsf4lE9Q2N0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cpsf4lE9Q2N0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cpsf4lE9Q2N0 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.07□□□□□ -0.8
Cpsf4lE9Q2N0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Cpsf4lE9Q2N0 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.07□□□□□ -0.8
Cpsf4lE9Q2N0 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cpsf4lE9Q2N0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Cpsf4lE9Q2N0 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms