Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm9062-201ENSMUST00000117712 727 ntBASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm14071-201ENSMUST00000117817 509 ntBASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm12616-201ENSMUST00000118594 382 ntBASIC12.44□□□□□ -0.42
Scn1aA2APX8 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm15881-201ENSMUST00000148792 942 ntBASIC12.44□□□□□ -0.42
Scn1aA2APX8 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm12624-201ENSMUST00000177615 382 ntBASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm12621-201ENSMUST00000177760 382 ntBASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm12615-201ENSMUST00000177970 382 ntBASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm12622-201ENSMUST00000177975 382 ntBASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm12627-201ENSMUST00000178412 382 ntBASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm12625-201ENSMUST00000179122 382 ntBASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm12614-201ENSMUST00000179586 382 ntBASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm12613-201ENSMUST00000180323 382 ntBASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm9211-201ENSMUST00000182882 975 ntBASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1aA2APX8 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Gm11667-201ENSMUST00000119828 486 ntBASIC12.43□□□□□ -0.42
Scn1aA2APX8 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.43□□□□□ -0.42
Scn1aA2APX8 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.43□□□□□ -0.42
Scn1aA2APX8 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1aA2APX8 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.42□□□□□ -0.42
Scn1aA2APX8 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Scn1aA2APX8 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.42□□□□□ -0.42
Scn1aA2APX8 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.42□□□□□ -0.42
Scn1aA2APX8 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms