Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb3Q9ERD7 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Gm8885-201ENSMUST00000189382 598 ntBASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Gm9136-201ENSMUST00000193368 454 ntBASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Gm18212-201ENSMUST00000211678 889 ntBASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Gm10312-201ENSMUST00000078515 489 ntBASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb3Q9ERD7 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms