Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC104596.2-201ENST00000512793 793 ntBASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 RNA5SP421-201ENST00000516864 134 ntBASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 LINC02560-201ENST00000596379 459 ntBASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 AC009118.2-201ENST00000613275 655 ntBASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 AC011498.7-201ENST00000624986 2027 ntBASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 ACKR1-201ENST00000368121 1240 ntBASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 MIR770-201ENST00000390219 98 ntBASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 AC092364.2-202ENST00000597012 1073 ntBASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 AC008494.3-201ENST00000606615 944 ntBASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 AJ011932.1-201ENST00000621707 465 ntBASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.76□□□□□ -0.21
RSPO3Q9BXY4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 AC020910.6-201ENST00000623084 1459 ntBASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 CLUHP2-201ENST00000426660 1303 ntBASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 POM121L8P-201ENST00000417732 1281 ntBASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 POM121L9P-203ENST00000441984 1285 ntBASIC13.75□□□□□ -0.21
RSPO3Q9BXY4 BCRP1-201ENST00000444246 691 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms