Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Gm12986-201ENSMUST00000119037 967 ntBASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Olfml3-204ENSMUST00000169286 874 ntBASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Mir6359-201ENSMUST00000183668 81 ntBASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Gm18001-201ENSMUST00000212023 688 ntBASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Gm5178-201ENSMUST00000219380 898 ntBASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Gm19927-201ENSMUST00000185792 781 ntBASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Gm43547-201ENSMUST00000197729 328 ntBASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh15Q99PJ1 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Gm24294-201ENSMUST00000158295 277 ntBASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Gm4462-201ENSMUST00000166453 492 ntBASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Gm6216-201ENSMUST00000182390 687 ntBASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Gm44124-201ENSMUST00000204159 472 ntBASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh15Q99PJ1 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 Gm14052-201ENSMUST00000121434 1031 ntBASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 Gm20493-201ENSMUST00000173706 213 ntBASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 Gm6518-201ENSMUST00000208450 342 ntBASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 AC107763.1-201ENSMUST00000226082 1365 ntBASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 Gm26782-203ENSMUST00000227103 751 ntBASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh15Q99PJ1 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms