Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.24□□□□□ -0.45
CopaQ8CIE6 Gm14760-201ENSMUST00000121831 999 ntBASIC12.24□□□□□ -0.45
CopaQ8CIE6 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 B9d1os-201ENSMUST00000137010 674 ntBASIC12.24□□□□□ -0.45
CopaQ8CIE6 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Rmrp-201ENSMUST00000157463 271 ntBASIC12.24□□□□□ -0.45
CopaQ8CIE6 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Gm42937-201ENSMUST00000197360 752 ntBASIC12.24□□□□□ -0.45
CopaQ8CIE6 Gm3786-201ENSMUST00000202659 378 ntBASIC12.24□□□□□ -0.45
CopaQ8CIE6 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.24□□□□□ -0.45
CopaQ8CIE6 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.24□□□□□ -0.45
CopaQ8CIE6 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.24□□□□□ -0.45
CopaQ8CIE6 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.24□□□□□ -0.45
CopaQ8CIE6 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CopaQ8CIE6 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.23□□□□□ -0.45
CopaQ8CIE6 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.23□□□□□ -0.45
CopaQ8CIE6 Gm10652-201ENSMUST00000199790 2622 ntBASIC12.23□□□□□ -0.45
CopaQ8CIE6 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Gm25732-201ENSMUST00000175168 60 ntBASIC12.23□□□□□ -0.45
CopaQ8CIE6 Mir6979-201ENSMUST00000183927 56 ntBASIC12.23□□□□□ -0.45
CopaQ8CIE6 Gm28450-201ENSMUST00000187349 638 ntBASIC12.23□□□□□ -0.45
CopaQ8CIE6 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.23□□□□□ -0.45
CopaQ8CIE6 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopaQ8CIE6 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms