Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Gm11793-201ENSMUST00000120433 981 ntBASIC14.72□□□□□ -0.05
Smc5Q8CG46 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Smc5Q8CG46 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Gm6013-201ENSMUST00000212264 699 ntBASIC14.72□□□□□ -0.05
Smc5Q8CG46 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.72□□□□□ -0.05
Smc5Q8CG46 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smc5Q8CG46 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc5Q8CG46 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Smc5Q8CG46 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc5Q8CG46 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc5Q8CG46 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Smc5Q8CG46 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc5Q8CG46 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc5Q8CG46 Gm11989-201ENSMUST00000117240 672 ntBASIC14.71□□□□□ -0.05
Smc5Q8CG46 Gm11362-201ENSMUST00000118838 850 ntBASIC14.71□□□□□ -0.05
Smc5Q8CG46 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smc5Q8CG46 Snora78-201ENSMUST00000158630 128 ntBASIC14.71□□□□□ -0.05
Smc5Q8CG46 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.71□□□□□ -0.05
Smc5Q8CG46 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.71□□□□□ -0.05
Smc5Q8CG46 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc5Q8CG46 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc5Q8CG46 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC14.71□□□□□ -0.05
Smc5Q8CG46 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Smc5Q8CG46 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc5Q8CG46 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.71□□□□□ -0.05
Smc5Q8CG46 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Smc5Q8CG46 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc5Q8CG46 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smc5Q8CG46 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smc5Q8CG46 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smc5Q8CG46 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smc5Q8CG46 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smc5Q8CG46 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smc5Q8CG46 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Smc5Q8CG46 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.7□□□□□ -0.06
Smc5Q8CG46 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Gm15991-202ENSMUST00000212123 3565 ntBASIC14.7□□□□□ -0.06
Smc5Q8CG46 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Mir1982-201ENSMUST00000157368 74 ntBASIC14.7□□□□□ -0.06
Smc5Q8CG46 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Smc5Q8CG46 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Smc5Q8CG46 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Gm4607-201ENSMUST00000206649 577 ntBASIC14.7□□□□□ -0.06
Smc5Q8CG46 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Gm38292-201ENSMUST00000192646 3045 ntBASIC14.7□□□□□ -0.06
Smc5Q8CG46 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.7□□□□□ -0.06
Smc5Q8CG46 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smc5Q8CG46 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms