Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Gm26134-201ENSMUST00000178484 110 ntBASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Gm44323-201ENSMUST00000198689 129 ntBASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Gm43380-201ENSMUST00000200421 220 ntBASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Gm10254-201ENSMUST00000052888 867 ntBASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup98Q6PFD9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Gm14807-201ENSMUST00000116640 983 ntBASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Gm10169-201ENSMUST00000121822 348 ntBASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Olfml3-204ENSMUST00000169286 874 ntBASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Mir7051-201ENSMUST00000184167 73 ntBASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Gm29155-201ENSMUST00000185910 269 ntBASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Gm43912-201ENSMUST00000204352 538 ntBASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.84□□□□□ -0.19
Nup98Q6PFD9 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nup98Q6PFD9 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nup98Q6PFD9 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
Nup98Q6PFD9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Gm12179-201ENSMUST00000118344 1272 ntBASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Gm17192-201ENSMUST00000169031 511 ntBASIC13.83□□□□□ -0.2
Nup98Q6PFD9 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Gm30946-201ENSMUST00000198288 724 ntBASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC13.83□□□□□ -0.2
Nup98Q6PFD9 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Gm44573-201ENSMUST00000191753 2370 ntBASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup98Q6PFD9 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Gm12218-201ENSMUST00000117666 399 ntBASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Gm19587-201ENSMUST00000191395 545 ntBASIC13.83□□□□□ -0.2
Nup98Q6PFD9 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.83□□□□□ -0.2
Nup98Q6PFD9 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms