Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Col11a1Q61245 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Mir744-201ENSMUST00000103261 100 ntBASIC13.11□□□□□ -0.31
Col11a1Q61245 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Gm7627-201ENSMUST00000183205 999 ntBASIC13.11□□□□□ -0.31
Col11a1Q61245 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Gm9102-201ENSMUST00000219250 465 ntBASIC13.11□□□□□ -0.31
Col11a1Q61245 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Col11a1Q61245 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Col11a1Q61245 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Gm43167-201ENSMUST00000202001 1606 ntBASIC13.11□□□□□ -0.31
Col11a1Q61245 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Col11a1Q61245 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Col11a1Q61245 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Col11a1Q61245 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.11□□□□□ -0.31
Col11a1Q61245 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Col11a1Q61245 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC13.11□□□□□ -0.31
Col11a1Q61245 Gm15707-201ENSMUST00000118804 996 ntBASIC13.11□□□□□ -0.31
Col11a1Q61245 Gm14165-201ENSMUST00000121456 952 ntBASIC13.11□□□□□ -0.31
Col11a1Q61245 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC13.11□□□□□ -0.31
Col11a1Q61245 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Col11a1Q61245 Gm27826-201ENSMUST00000175282 255 ntBASIC13.11□□□□□ -0.31
Col11a1Q61245 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC13.11□□□□□ -0.31
Col11a1Q61245 Gm8756-201ENSMUST00000183250 929 ntBASIC13.11□□□□□ -0.31
Col11a1Q61245 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Col11a1Q61245 Gm17796-201ENSMUST00000189015 1213 ntBASIC13.11□□□□□ -0.31
Col11a1Q61245 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.11□□□□□ -0.31
Col11a1Q61245 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col11a1Q61245 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Col11a1Q61245 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.1□□□□□ -0.31
Col11a1Q61245 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
Col11a1Q61245 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC13.1□□□□□ -0.31
Col11a1Q61245 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Gm15329-201ENSMUST00000121408 155 ntBASIC13.1□□□□□ -0.31
Col11a1Q61245 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC13.1□□□□□ -0.31
Col11a1Q61245 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Col11a1Q61245 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC13.1□□□□□ -0.31
Col11a1Q61245 Gm8255-201ENSMUST00000218693 305 ntBASIC13.1□□□□□ -0.31
Col11a1Q61245 Gm4930-201ENSMUST00000219926 1087 ntBASIC13.1□□□□□ -0.31
Col11a1Q61245 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.1□□□□□ -0.31
Col11a1Q61245 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.1□□□□□ -0.31
Col11a1Q61245 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.1□□□□□ -0.31
Col11a1Q61245 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms