Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm24891-201ENSMUST00000104391 136 ntBASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm14219-201ENSMUST00000120414 288 ntBASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm15610-201ENSMUST00000120584 195 ntBASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm6114-201ENSMUST00000182472 968 ntBASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Lect2-202ENSMUST00000225183 823 ntBASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm12036-201ENSMUST00000120008 530 ntBASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm24844-201ENSMUST00000158679 127 ntBASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm18201-201ENSMUST00000174735 875 ntBASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc88aQ5SNZ0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm12943-201ENSMUST00000119616 210 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms