Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Gm27989-201ENSMUST00000184721 107 ntBASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Gm28760-201ENSMUST00000185995 736 ntBASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Gm38294-201ENSMUST00000192831 381 ntBASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 AC192088.1-201ENSMUST00000227561 301 ntBASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Gm9755-201ENSMUST00000032981 1356 ntBASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Gm43372-201ENSMUST00000202662 3016 ntBASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Trav3-3Q5R1C3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 AC132863.2-201ENSMUST00000226643 799 ntBASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms