Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC9.79□□□□□ -0.84
Trim63Q38HM4 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Gm19680-201ENSMUST00000095050 1513 ntBASIC9.78□□□□□ -0.84
Trim63Q38HM4 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Arhgap32-206ENSMUST00000182802 5621 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC9.78□□□□□ -0.84
Trim63Q38HM4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Trim63Q38HM4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Gm33320-201ENSMUST00000192232 530 ntBASIC9.78□□□□□ -0.84
Trim63Q38HM4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Gm38123-201ENSMUST00000194990 2779 ntBASIC9.78□□□□□ -0.84
Trim63Q38HM4 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.78□□□□□ -0.84
Trim63Q38HM4 Gm11873-201ENSMUST00000117877 1304 ntBASIC9.78□□□□□ -0.84
Trim63Q38HM4 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC9.78□□□□□ -0.84
Trim63Q38HM4 Gm42466-201ENSMUST00000202099 1301 ntBASIC9.78□□□□□ -0.84
Trim63Q38HM4 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Gm7967-202ENSMUST00000191042 5042 ntBASIC9.78□□□□□ -0.84
Trim63Q38HM4 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim63Q38HM4 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trim63Q38HM4 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trim63Q38HM4 Ttc28-206ENSMUST00000156290 10688 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trim63Q38HM4 AC165148.1-201ENSMUST00000224795 2372 ntBASIC9.77□□□□□ -0.85
Trim63Q38HM4 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Gm7153-201ENSMUST00000117092 455 ntBASIC9.77□□□□□ -0.85
Trim63Q38HM4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC9.77□□□□□ -0.85
Trim63Q38HM4 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC9.77□□□□□ -0.85
Trim63Q38HM4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trim63Q38HM4 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Gm6283-201ENSMUST00000182369 1000 ntBASIC9.77□□□□□ -0.85
Trim63Q38HM4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Trim63Q38HM4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Dysf-203ENSMUST00000113818 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Trim63Q38HM4 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim63Q38HM4 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms