Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scn1bP97952 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.9□□□□□ -0.66
Scn1bP97952 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scn1bP97952 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Scn1bP97952 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.9□□□□□ -0.66
Scn1bP97952 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Scn1bP97952 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Scn1bP97952 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scn1bP97952 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Scn1bP97952 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scn1bP97952 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Scn1bP97952 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Scn1bP97952 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scn1bP97952 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Scn1bP97952 Gm5687-201ENSMUST00000118252 640 ntBASIC10.9□□□□□ -0.66
Scn1bP97952 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Scn1bP97952 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.9□□□□□ -0.66
Scn1bP97952 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.9□□□□□ -0.66
Scn1bP97952 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Scn1bP97952 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scn1bP97952 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scn1bP97952 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scn1bP97952 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Scn1bP97952 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.9□□□□□ -0.66
Scn1bP97952 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Scn1bP97952 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scn1bP97952 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Scn1bP97952 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scn1bP97952 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Scn1bP97952 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Scn1bP97952 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scn1bP97952 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scn1bP97952 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Scn1bP97952 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Scn1bP97952 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Scn1bP97952 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Scn1bP97952 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Scn1bP97952 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Scn1bP97952 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Scn1bP97952 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.89□□□□□ -0.67
Scn1bP97952 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Scn1bP97952 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Scn1bP97952 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.89□□□□□ -0.67
Scn1bP97952 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Scn1bP97952 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.89□□□□□ -0.67
Scn1bP97952 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Scn1bP97952 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Gm11918-201ENSMUST00000121660 179 ntBASIC10.89□□□□□ -0.67
Scn1bP97952 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.89□□□□□ -0.67
Scn1bP97952 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Gm28693-202ENSMUST00000190758 331 ntBASIC10.89□□□□□ -0.67
Scn1bP97952 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.89□□□□□ -0.67
Scn1bP97952 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.89□□□□□ -0.67
Scn1bP97952 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.89□□□□□ -0.67
Scn1bP97952 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Gm18473-201ENSMUST00000220543 868 ntBASIC10.89□□□□□ -0.67
Scn1bP97952 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Scn1bP97952 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.89□□□□□ -0.67
Scn1bP97952 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Scn1bP97952 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Scn1bP97952 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.89□□□□□ -0.67
Scn1bP97952 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.89□□□□□ -0.67
Scn1bP97952 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scn1bP97952 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Scn1bP97952 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Scn1bP97952 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.88□□□□□ -0.67
Scn1bP97952 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms