Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Smad1P70340 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.35□□□□□ -0.43
Smad1P70340 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.34□□□□□ -0.43
Smad1P70340 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.34□□□□□ -0.43
Smad1P70340 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smad1P70340 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Smad1P70340 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.34□□□□□ -0.43
Smad1P70340 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.34□□□□□ -0.43
Smad1P70340 Gm5950-201ENSMUST00000213337 772 ntBASIC12.34□□□□□ -0.43
Smad1P70340 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.34□□□□□ -0.43
Smad1P70340 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Smad1P70340 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Smad1P70340 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.34□□□□□ -0.43
Smad1P70340 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Smad1P70340 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smad1P70340 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Smad1P70340 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smad1P70340 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smad1P70340 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.34□□□□□ -0.43
Smad1P70340 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.34□□□□□ -0.43
Smad1P70340 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Smad1P70340 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.33□□□□□ -0.43
Smad1P70340 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.33□□□□□ -0.44
Smad1P70340 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smad1P70340 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.33□□□□□ -0.44
Smad1P70340 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Gm14999-201ENSMUST00000121039 624 ntBASIC12.33□□□□□ -0.44
Smad1P70340 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smad1P70340 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.33□□□□□ -0.44
Smad1P70340 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Gm25732-201ENSMUST00000175168 60 ntBASIC12.33□□□□□ -0.44
Smad1P70340 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Smad1P70340 Gm42937-201ENSMUST00000197360 752 ntBASIC12.33□□□□□ -0.44
Smad1P70340 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.33□□□□□ -0.44
Smad1P70340 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.33□□□□□ -0.44
Smad1P70340 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.33□□□□□ -0.44
Smad1P70340 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.33□□□□□ -0.44
Smad1P70340 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smad1P70340 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.33□□□□□ -0.44
Smad1P70340 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Smad1P70340 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Smad1P70340 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smad1P70340 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smad1P70340 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smad1P70340 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Smad1P70340 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms