Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cd9P40240 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cd9P40240 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.78□□□□□ -0.52
Cd9P40240 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.78□□□□□ -0.52
Cd9P40240 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.78□□□□□ -0.52
Cd9P40240 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.78□□□□□ -0.52
Cd9P40240 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cd9P40240 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cd9P40240 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cd9P40240 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cd9P40240 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cd9P40240 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cd9P40240 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cd9P40240 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Cd9P40240 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cd9P40240 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cd9P40240 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cd9P40240 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Cd9P40240 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Cd9P40240 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd9P40240 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd9P40240 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd9P40240 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.77□□□□□ -0.53
Cd9P40240 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Cd9P40240 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cd9P40240 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd9P40240 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd9P40240 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.77□□□□□ -0.53
Cd9P40240 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.77□□□□□ -0.53
Cd9P40240 Gm17376-201ENSMUST00000166016 84 ntBASIC11.77□□□□□ -0.53
Cd9P40240 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cd9P40240 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cd9P40240 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cd9P40240 Gm27627-201ENSMUST00000183644 150 ntBASIC11.77□□□□□ -0.53
Cd9P40240 Mir8093-201ENSMUST00000185043 137 ntBASIC11.77□□□□□ -0.53
Cd9P40240 Gm29615-201ENSMUST00000185371 697 ntBASIC11.77□□□□□ -0.53
Cd9P40240 Gm28224-201ENSMUST00000186078 697 ntBASIC11.77□□□□□ -0.53
Cd9P40240 Gm29001-201ENSMUST00000186177 697 ntBASIC11.77□□□□□ -0.53
Cd9P40240 Gm28292-201ENSMUST00000186593 697 ntBASIC11.77□□□□□ -0.53
Cd9P40240 Gm28101-201ENSMUST00000187608 697 ntBASIC11.77□□□□□ -0.53
Cd9P40240 Gm29076-201ENSMUST00000187689 697 ntBASIC11.77□□□□□ -0.53
Cd9P40240 Gm28302-201ENSMUST00000187931 697 ntBASIC11.77□□□□□ -0.53
Cd9P40240 Gm28646-201ENSMUST00000188220 697 ntBASIC11.77□□□□□ -0.53
Cd9P40240 Gm28205-201ENSMUST00000189177 697 ntBASIC11.77□□□□□ -0.53
Cd9P40240 Gm29032-201ENSMUST00000189797 697 ntBASIC11.77□□□□□ -0.53
Cd9P40240 Gm28695-201ENSMUST00000190300 697 ntBASIC11.77□□□□□ -0.53
Cd9P40240 Gm37448-201ENSMUST00000192795 697 ntBASIC11.77□□□□□ -0.53
Cd9P40240 Gm43184-201ENSMUST00000197247 542 ntBASIC11.77□□□□□ -0.53
Cd9P40240 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cd9P40240 Gm18038-201ENSMUST00000197900 485 ntBASIC11.77□□□□□ -0.53
Cd9P40240 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Cd9P40240 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cd9P40240 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.77□□□□□ -0.53
Cd9P40240 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd9P40240 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd9P40240 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd9P40240 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd9P40240 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cd9P40240 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Cd9P40240 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd9P40240 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd9P40240 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cd9P40240 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cd9P40240 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Cd9P40240 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cd9P40240 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd9P40240 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cd9P40240 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.77□□□□□ -0.53
Cd9P40240 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd9P40240 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd9P40240 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd9P40240 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd9P40240 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.76□□□□□ -0.53
Cd9P40240 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd9P40240 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd9P40240 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cd9P40240 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd9P40240 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd9P40240 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd9P40240 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cd9P40240 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cd9P40240 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.76□□□□□ -0.53
Cd9P40240 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd9P40240 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd9P40240 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd9P40240 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd9P40240 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Cd9P40240 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms