Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hdac1O09106 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hdac1O09106 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hdac1O09106 Gm18806-201ENSMUST00000207607 1775 ntBASIC14.18□□□□□ -0.14
Hdac1O09106 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac1O09106 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac1O09106 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac1O09106 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac1O09106 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac1O09106 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac1O09106 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac1O09106 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac1O09106 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac1O09106 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac1O09106 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hdac1O09106 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac1O09106 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac1O09106 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac1O09106 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac1O09106 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac1O09106 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac1O09106 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac1O09106 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac1O09106 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac1O09106 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Hdac1O09106 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac1O09106 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac1O09106 Gm38292-201ENSMUST00000192646 3045 ntBASIC14.17□□□□□ -0.14
Hdac1O09106 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hdac1O09106 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac1O09106 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac1O09106 Gm14644-201ENSMUST00000116671 647 ntBASIC14.17□□□□□ -0.14
Hdac1O09106 Gm4986-201ENSMUST00000119731 549 ntBASIC14.17□□□□□ -0.14
Hdac1O09106 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac1O09106 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.17□□□□□ -0.14
Hdac1O09106 Gm43118-201ENSMUST00000199149 775 ntBASIC14.17□□□□□ -0.14
Hdac1O09106 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hdac1O09106 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.17□□□□□ -0.14
Hdac1O09106 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac1O09106 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.17□□□□□ -0.14
Hdac1O09106 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hdac1O09106 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac1O09106 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac1O09106 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.17□□□□□ -0.14
Hdac1O09106 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hdac1O09106 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac1O09106 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac1O09106 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hdac1O09106 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hdac1O09106 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hdac1O09106 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Hdac1O09106 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.17□□□□□ -0.14
Hdac1O09106 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac1O09106 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.17□□□□□ -0.14
Hdac1O09106 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac1O09106 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac1O09106 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac1O09106 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Hdac1O09106 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hdac1O09106 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Hdac1O09106 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hdac1O09106 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.16□□□□□ -0.14
Hdac1O09106 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.16□□□□□ -0.14
Hdac1O09106 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.16□□□□□ -0.14
Hdac1O09106 Mospd4-201ENSMUST00000180618 576 ntBASIC14.16□□□□□ -0.14
Hdac1O09106 Gm8602-201ENSMUST00000184045 607 ntBASIC14.16□□□□□ -0.14
Hdac1O09106 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.16□□□□□ -0.14
Hdac1O09106 Gm43133-201ENSMUST00000197472 463 ntBASIC14.16□□□□□ -0.14
Hdac1O09106 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.16□□□□□ -0.14
Hdac1O09106 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.16□□□□□ -0.14
Hdac1O09106 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.16□□□□□ -0.14
Hdac1O09106 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.16□□□□□ -0.14
Hdac1O09106 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Gm15991-202ENSMUST00000212123 3565 ntBASIC14.16□□□□□ -0.14
Hdac1O09106 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC14.16□□□□□ -0.14
Hdac1O09106 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac1O09106 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms