Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Olfr584-201ENSMUST00000098210 964 ntBASIC9.61□□□□□ -0.87
Chd6A3KFM7 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Gm37691-201ENSMUST00000192147 2573 ntBASIC9.61□□□□□ -0.87
Chd6A3KFM7 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Gm4310-201ENSMUST00000177847 889 ntBASIC9.61□□□□□ -0.87
Chd6A3KFM7 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC9.61□□□□□ -0.87
Chd6A3KFM7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Gm6158-201ENSMUST00000109467 904 ntBASIC9.6□□□□□ -0.87
Chd6A3KFM7 Gm16418-201ENSMUST00000118577 171 ntBASIC9.6□□□□□ -0.87
Chd6A3KFM7 Gm12164-201ENSMUST00000121695 551 ntBASIC9.6□□□□□ -0.87
Chd6A3KFM7 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.6□□□□□ -0.87
Chd6A3KFM7 Gm16560-201ENSMUST00000159115 404 ntBASIC9.6□□□□□ -0.87
Chd6A3KFM7 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Gm18030-201ENSMUST00000222163 731 ntBASIC9.6□□□□□ -0.87
Chd6A3KFM7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Gm8798-201ENSMUST00000211877 1661 ntBASIC9.6□□□□□ -0.87
Chd6A3KFM7 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Prss23os-202ENSMUST00000179361 1362 ntBASIC9.6□□□□□ -0.87
Chd6A3KFM7 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Gm13422-201ENSMUST00000118834 504 ntBASIC9.6□□□□□ -0.87
Chd6A3KFM7 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Gm4705-201ENSMUST00000177415 354 ntBASIC9.6□□□□□ -0.87
Chd6A3KFM7 Gm45225-201ENSMUST00000206852 1139 ntBASIC9.6□□□□□ -0.87
Chd6A3KFM7 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.6□□□□□ -0.87
Chd6A3KFM7 CT010480.2-201ENSMUST00000225424 737 ntBASIC9.6□□□□□ -0.87
Chd6A3KFM7 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC9.6□□□□□ -0.87
Chd6A3KFM7 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC9.59□□□□□ -0.87
Chd6A3KFM7 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 BB187690-201ENSMUST00000198619 1176 ntBASIC9.59□□□□□ -0.87
Chd6A3KFM7 Gm7525-201ENSMUST00000219425 454 ntBASIC9.59□□□□□ -0.87
Chd6A3KFM7 AC159006.3-201ENSMUST00000226918 664 ntBASIC9.59□□□□□ -0.87
Chd6A3KFM7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms