Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 FKBP4P6-201ENST00000457486 1332 ntBASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 AC015818.8-201ENST00000587907 1519 ntBASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 CHMP1AP1-201ENST00000445563 662 ntBASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 AL591846.1-201ENST00000451736 433 ntBASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 GPR182-203ENST00000622922 591 ntBASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 ABBA01031663.1-201ENST00000635630 790 ntBASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 KRT8P4-201ENST00000509735 1454 ntBASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 FGD5P1-202ENST00000614866 2498 ntBASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 AC099063.4-201ENST00000641099 1602 ntBASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 CICP24-201ENST00000605464 2705 ntBASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 AC007969.1-201ENST00000433675 447 ntBASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 AC022494.1-201ENST00000466044 728 ntBASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 ZNF767P-206ENST00000513792 565 ntBASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 NORAD-201ENST00000565493 5339 ntBASIC18.29■□□□□ 0.52
HMG20BQ9P0W2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 AC023090.2-201ENST00000625182 2110 ntBASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 RN7SKP230-201ENST00000365642 335 ntBASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 BTBD6P1-201ENST00000412176 1267 ntBASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 MTX1P1-201ENST00000440904 838 ntBASIC18.28■□□□□ 0.52
HMG20BQ9P0W2 PFN1P12-201ENST00000455938 534 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms