Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
RTRAFQ9CQE8 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Btrc-209ENSMUST00000224478 2194 ntBASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Gm19220-201ENSMUST00000222682 803 ntBASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.7□□□□□ -0.86
RTRAFQ9CQE8 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Gm6152-201ENSMUST00000151704 340 ntBASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Gm27989-201ENSMUST00000184721 107 ntBASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Gm18307-201ENSMUST00000206864 949 ntBASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RTRAFQ9CQE8 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms