Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.71□□□□□ -0.37
Sf3b1Q99NB9 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3b1Q99NB9 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3b1Q99NB9 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.71□□□□□ -0.37
Sf3b1Q99NB9 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sf3b1Q99NB9 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3b1Q99NB9 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3b1Q99NB9 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.71□□□□□ -0.37
Sf3b1Q99NB9 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3b1Q99NB9 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3b1Q99NB9 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Sf3b1Q99NB9 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3b1Q99NB9 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3b1Q99NB9 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3b1Q99NB9 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3b1Q99NB9 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3b1Q99NB9 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3b1Q99NB9 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Sf3b1Q99NB9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3b1Q99NB9 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Sf3b1Q99NB9 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Sf3b1Q99NB9 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3b1Q99NB9 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Gm13263-201ENSMUST00000121271 838 ntBASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Gm18893-201ENSMUST00000198416 943 ntBASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3b1Q99NB9 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Gm15004-201ENSMUST00000119192 630 ntBASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Gm15610-201ENSMUST00000120584 195 ntBASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Gm42599-201ENSMUST00000201308 469 ntBASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.69□□□□□ -0.38
Sf3b1Q99NB9 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms