Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Raf1Q99N57 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raf1Q99N57 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raf1Q99N57 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raf1Q99N57 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Raf1Q99N57 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Raf1Q99N57 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raf1Q99N57 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raf1Q99N57 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raf1Q99N57 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raf1Q99N57 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Raf1Q99N57 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Raf1Q99N57 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raf1Q99N57 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Raf1Q99N57 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.81□□□□□ -0.68
Raf1Q99N57 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Raf1Q99N57 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raf1Q99N57 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raf1Q99N57 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Raf1Q99N57 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Raf1Q99N57 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raf1Q99N57 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raf1Q99N57 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raf1Q99N57 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Raf1Q99N57 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Raf1Q99N57 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.8□□□□□ -0.68
Raf1Q99N57 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Raf1Q99N57 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.8□□□□□ -0.68
Raf1Q99N57 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Raf1Q99N57 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.8□□□□□ -0.68
Raf1Q99N57 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.8□□□□□ -0.68
Raf1Q99N57 Gm25668-201ENSMUST00000157700 129 ntBASIC10.8□□□□□ -0.68
Raf1Q99N57 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Gm2383-201ENSMUST00000181461 807 ntBASIC10.8□□□□□ -0.68
Raf1Q99N57 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.8□□□□□ -0.68
Raf1Q99N57 Gm6621-201ENSMUST00000193251 772 ntBASIC10.8□□□□□ -0.68
Raf1Q99N57 Gm38092-201ENSMUST00000195600 653 ntBASIC10.8□□□□□ -0.68
Raf1Q99N57 Gm5363-201ENSMUST00000211927 938 ntBASIC10.8□□□□□ -0.68
Raf1Q99N57 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.8□□□□□ -0.68
Raf1Q99N57 Gm6082-201ENSMUST00000215204 454 ntBASIC10.8□□□□□ -0.68
Raf1Q99N57 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Raf1Q99N57 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Raf1Q99N57 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Raf1Q99N57 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.8□□□□□ -0.68
Raf1Q99N57 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.8□□□□□ -0.68
Raf1Q99N57 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Raf1Q99N57 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Raf1Q99N57 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Raf1Q99N57 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Raf1Q99N57 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Raf1Q99N57 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Raf1Q99N57 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Raf1Q99N57 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Raf1Q99N57 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.79□□□□□ -0.68
Raf1Q99N57 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Raf1Q99N57 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Raf1Q99N57 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Raf1Q99N57 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Raf1Q99N57 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Raf1Q99N57 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Raf1Q99N57 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Raf1Q99N57 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.79□□□□□ -0.68
Raf1Q99N57 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Raf1Q99N57 Gm24255-201ENSMUST00000104481 128 ntBASIC10.79□□□□□ -0.68
Raf1Q99N57 Gm4986-201ENSMUST00000119731 549 ntBASIC10.79□□□□□ -0.68
Raf1Q99N57 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.79□□□□□ -0.68
Raf1Q99N57 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Raf1Q99N57 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Raf1Q99N57 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Raf1Q99N57 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Raf1Q99N57 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.79□□□□□ -0.68
Raf1Q99N57 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.79□□□□□ -0.68
Raf1Q99N57 Gm9022-201ENSMUST00000182482 992 ntBASIC10.79□□□□□ -0.68
Raf1Q99N57 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Raf1Q99N57 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.79□□□□□ -0.68
Raf1Q99N57 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Raf1Q99N57 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.79□□□□□ -0.68
Raf1Q99N57 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Raf1Q99N57 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 113.9 ms