Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Gm43143-201ENSMUST00000196083 2023 ntBASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh18Q8VHR0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Pcdh18Q8VHR0 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Gm16296-201ENSMUST00000159905 325 ntBASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Gm24526-201ENSMUST00000082921 158 ntBASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Gm10268-201ENSMUST00000085340 555 ntBASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh18Q8VHR0 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Gm32025-201ENSMUST00000217960 307 ntBASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh18Q8VHR0 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms