Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Gm15207-201ENSMUST00000119259 442 ntBASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Gm12029-201ENSMUST00000120073 832 ntBASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Gm15566-201ENSMUST00000121130 590 ntBASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Gm4310-201ENSMUST00000177847 889 ntBASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Gm19287-201ENSMUST00000203190 358 ntBASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Gm43916-201ENSMUST00000205062 967 ntBASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx39aQ8VDW0 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.27□□□□□ -0.28
Ddx39aQ8VDW0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx39aQ8VDW0 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.27□□□□□ -0.28
Ddx39aQ8VDW0 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx39aQ8VDW0 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.27□□□□□ -0.28
Ddx39aQ8VDW0 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Ddx39aQ8VDW0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx39aQ8VDW0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx39aQ8VDW0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx39aQ8VDW0 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.27□□□□□ -0.28
Ddx39aQ8VDW0 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Ddx39aQ8VDW0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Ddx39aQ8VDW0 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Gm15595-201ENSMUST00000120840 961 ntBASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Gm22144-201ENSMUST00000157402 102 ntBASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Gm9132-201ENSMUST00000210182 832 ntBASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Gm10179-201ENSMUST00000086233 688 ntBASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx39aQ8VDW0 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx39aQ8VDW0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx39aQ8VDW0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx39aQ8VDW0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx39aQ8VDW0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx39aQ8VDW0 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.26□□□□□ -0.29
Ddx39aQ8VDW0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx39aQ8VDW0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ddx39aQ8VDW0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx39aQ8VDW0 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
Ddx39aQ8VDW0 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx39aQ8VDW0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Ddx39aQ8VDW0 Gm11956-201ENSMUST00000119525 512 ntBASIC13.26□□□□□ -0.29
Ddx39aQ8VDW0 Gm13263-201ENSMUST00000121271 838 ntBASIC13.26□□□□□ -0.29
Ddx39aQ8VDW0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms