Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf170Q8CBG9 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Gm22018-201ENSMUST00000104357 131 ntBASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Gm12957-201ENSMUST00000117835 377 ntBASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Gm13736-201ENSMUST00000119272 253 ntBASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 AY702102-202ENSMUST00000194651 1173 ntBASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Gm24136-201ENSMUST00000083374 165 ntBASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf170Q8CBG9 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Gm12314-201ENSMUST00000118104 538 ntBASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Gm12058-201ENSMUST00000118614 437 ntBASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Gm18304-201ENSMUST00000189162 546 ntBASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Gm37201-201ENSMUST00000191845 523 ntBASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Gm42627-201ENSMUST00000197347 224 ntBASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Gm43133-201ENSMUST00000197472 463 ntBASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Gm44882-201ENSMUST00000205702 802 ntBASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rnf170Q8CBG9 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms