Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Gm24830-201ENSMUST00000102024 166 ntBASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Gm5035-201ENSMUST00000215581 927 ntBASIC12.72□□□□□ -0.37
Trim6Q8BGE7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Gm26232-201ENSMUST00000083360 166 ntBASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.72□□□□□ -0.37
Trim6Q8BGE7 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.71□□□□□ -0.37
Trim6Q8BGE7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.71□□□□□ -0.37
Trim6Q8BGE7 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Gm8738-201ENSMUST00000172606 329 ntBASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Gm5781-201ENSMUST00000219792 443 ntBASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim6Q8BGE7 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim6Q8BGE7 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trim6Q8BGE7 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim6Q8BGE7 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim6Q8BGE7 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.71□□□□□ -0.38
Trim6Q8BGE7 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.71□□□□□ -0.38
Trim6Q8BGE7 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim6Q8BGE7 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.71□□□□□ -0.38
Trim6Q8BGE7 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.71□□□□□ -0.38
Trim6Q8BGE7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim6Q8BGE7 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim6Q8BGE7 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim6Q8BGE7 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim6Q8BGE7 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms