Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
VcanQ62059 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VcanQ62059 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
VcanQ62059 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VcanQ62059 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VcanQ62059 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VcanQ62059 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
VcanQ62059 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
VcanQ62059 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VcanQ62059 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC10.9□□□□□ -0.66
VcanQ62059 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VcanQ62059 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.9□□□□□ -0.66
VcanQ62059 Gm9095-201ENSMUST00000117607 881 ntBASIC10.9□□□□□ -0.66
VcanQ62059 Gm9097-201ENSMUST00000120514 880 ntBASIC10.9□□□□□ -0.66
VcanQ62059 Gm7815-201ENSMUST00000196104 832 ntBASIC10.9□□□□□ -0.66
VcanQ62059 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VcanQ62059 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC10.9□□□□□ -0.66
VcanQ62059 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
VcanQ62059 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VcanQ62059 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VcanQ62059 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
VcanQ62059 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
VcanQ62059 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
VcanQ62059 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VcanQ62059 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC10.9□□□□□ -0.66
VcanQ62059 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VcanQ62059 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VcanQ62059 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VcanQ62059 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.9□□□□□ -0.66
VcanQ62059 Gm7701-201ENSMUST00000163185 1479 ntBASIC10.9□□□□□ -0.66
VcanQ62059 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VcanQ62059 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC10.9□□□□□ -0.66
VcanQ62059 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
VcanQ62059 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VcanQ62059 Gm29548-201ENSMUST00000187012 694 ntBASIC10.9□□□□□ -0.66
VcanQ62059 Gm28105-201ENSMUST00000187788 694 ntBASIC10.9□□□□□ -0.66
VcanQ62059 Gm45090-201ENSMUST00000208775 1148 ntBASIC10.9□□□□□ -0.66
VcanQ62059 AC192333.3-201ENSMUST00000224041 463 ntBASIC10.9□□□□□ -0.66
VcanQ62059 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.9□□□□□ -0.66
VcanQ62059 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VcanQ62059 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
VcanQ62059 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
VcanQ62059 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VcanQ62059 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
VcanQ62059 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
VcanQ62059 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
VcanQ62059 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
VcanQ62059 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
VcanQ62059 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.67
VcanQ62059 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
VcanQ62059 Gm16228-201ENSMUST00000162286 809 ntBASIC10.9□□□□□ -0.67
VcanQ62059 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.67
VcanQ62059 Gm4895-201ENSMUST00000181646 1137 ntBASIC10.9□□□□□ -0.67
VcanQ62059 Mir6387-201ENSMUST00000184042 108 ntBASIC10.9□□□□□ -0.67
VcanQ62059 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC10.9□□□□□ -0.67
VcanQ62059 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
VcanQ62059 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.67
VcanQ62059 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC10.9□□□□□ -0.67
VcanQ62059 Cacna2d3-208ENSMUST00000225985 918 ntBASIC10.9□□□□□ -0.67
VcanQ62059 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
VcanQ62059 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VcanQ62059 Klf10-203ENSMUST00000227920 2144 ntBASIC10.89□□□□□ -0.67
VcanQ62059 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.89□□□□□ -0.67
VcanQ62059 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
VcanQ62059 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VcanQ62059 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.89□□□□□ -0.67
VcanQ62059 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
VcanQ62059 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VcanQ62059 Gm12961-201ENSMUST00000120507 1050 ntBASIC10.89□□□□□ -0.67
VcanQ62059 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VcanQ62059 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VcanQ62059 BB187690-201ENSMUST00000198619 1176 ntBASIC10.89□□□□□ -0.67
VcanQ62059 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
VcanQ62059 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.89□□□□□ -0.67
VcanQ62059 AC166361.2-201ENSMUST00000219269 1415 ntBASIC10.89□□□□□ -0.67
VcanQ62059 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
VcanQ62059 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.89□□□□□ -0.67
VcanQ62059 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.89□□□□□ -0.67
VcanQ62059 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
VcanQ62059 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
VcanQ62059 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VcanQ62059 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
VcanQ62059 Gm12774-201ENSMUST00000117881 416 ntBASIC10.89□□□□□ -0.67
VcanQ62059 Gm9089-201ENSMUST00000122027 526 ntBASIC10.89□□□□□ -0.67
VcanQ62059 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
VcanQ62059 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC10.89□□□□□ -0.67
VcanQ62059 Gm43811-201ENSMUST00000202862 695 ntBASIC10.89□□□□□ -0.67
VcanQ62059 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VcanQ62059 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VcanQ62059 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VcanQ62059 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VcanQ62059 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VcanQ62059 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VcanQ62059 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Gm18391-201ENSMUST00000217189 658 ntBASIC10.88□□□□□ -0.67
VcanQ62059 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms