Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.52□□□□□ -0.57
ClpbQ60649 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.52□□□□□ -0.57
ClpbQ60649 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClpbQ60649 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
ClpbQ60649 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClpbQ60649 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
ClpbQ60649 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClpbQ60649 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClpbQ60649 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClpbQ60649 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClpbQ60649 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClpbQ60649 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClpbQ60649 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClpbQ60649 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.51□□□□□ -0.57
ClpbQ60649 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
ClpbQ60649 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
ClpbQ60649 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.51□□□□□ -0.57
ClpbQ60649 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Gm9230-201ENSMUST00000188228 532 ntBASIC11.51□□□□□ -0.57
ClpbQ60649 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Gm32999-201ENSMUST00000192693 562 ntBASIC11.51□□□□□ -0.57
ClpbQ60649 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.51□□□□□ -0.57
ClpbQ60649 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.51□□□□□ -0.57
ClpbQ60649 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Gm9996-201ENSMUST00000070359 913 ntBASIC11.51□□□□□ -0.57
ClpbQ60649 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
ClpbQ60649 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
ClpbQ60649 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.51□□□□□ -0.57
ClpbQ60649 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.51□□□□□ -0.57
ClpbQ60649 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ClpbQ60649 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
ClpbQ60649 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
ClpbQ60649 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.5□□□□□ -0.57
ClpbQ60649 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
ClpbQ60649 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
ClpbQ60649 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.5□□□□□ -0.57
ClpbQ60649 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.5□□□□□ -0.57
ClpbQ60649 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
ClpbQ60649 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.5□□□□□ -0.57
ClpbQ60649 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.5□□□□□ -0.57
ClpbQ60649 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.5□□□□□ -0.57
ClpbQ60649 Gm19187-201ENSMUST00000206781 892 ntBASIC11.5□□□□□ -0.57
ClpbQ60649 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Gm45598-202ENSMUST00000210719 986 ntBASIC11.5□□□□□ -0.57
ClpbQ60649 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
ClpbQ60649 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
ClpbQ60649 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.5□□□□□ -0.57
ClpbQ60649 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.5□□□□□ -0.57
ClpbQ60649 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
ClpbQ60649 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.5□□□□□ -0.57
ClpbQ60649 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
ClpbQ60649 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.5□□□□□ -0.57
ClpbQ60649 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
ClpbQ60649 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.5□□□□□ -0.57
ClpbQ60649 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms