Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcgP82348 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcgP82348 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcgP82348 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SgcgP82348 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcgP82348 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SgcgP82348 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SgcgP82348 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
SgcgP82348 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.82□□□□□ -0.52
SgcgP82348 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.82□□□□□ -0.52
SgcgP82348 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.82□□□□□ -0.52
SgcgP82348 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.82□□□□□ -0.52
SgcgP82348 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SgcgP82348 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.82□□□□□ -0.52
SgcgP82348 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SgcgP82348 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.82□□□□□ -0.52
SgcgP82348 Gm8199-201ENSMUST00000121323 823 ntBASIC11.82□□□□□ -0.52
SgcgP82348 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.82□□□□□ -0.52
SgcgP82348 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.82□□□□□ -0.52
SgcgP82348 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.82□□□□□ -0.52
SgcgP82348 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.82□□□□□ -0.52
SgcgP82348 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.82□□□□□ -0.52
SgcgP82348 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.82□□□□□ -0.52
SgcgP82348 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.82□□□□□ -0.52
SgcgP82348 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Gm10288-201ENSMUST00000084614 537 ntBASIC11.82□□□□□ -0.52
SgcgP82348 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SgcgP82348 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
SgcgP82348 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
SgcgP82348 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.82□□□□□ -0.52
SgcgP82348 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcgP82348 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SgcgP82348 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.81□□□□□ -0.52
SgcgP82348 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.81□□□□□ -0.52
SgcgP82348 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SgcgP82348 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SgcgP82348 Gm11941-201ENSMUST00000119904 610 ntBASIC11.81□□□□□ -0.52
SgcgP82348 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.81□□□□□ -0.52
SgcgP82348 Gm5706-201ENSMUST00000181525 993 ntBASIC11.81□□□□□ -0.52
SgcgP82348 Gm8100-201ENSMUST00000182906 988 ntBASIC11.81□□□□□ -0.52
SgcgP82348 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Gm17931-201ENSMUST00000208132 634 ntBASIC11.81□□□□□ -0.52
SgcgP82348 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SgcgP82348 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SgcgP82348 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.81□□□□□ -0.52
SgcgP82348 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcgP82348 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms