Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm1P58771 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm1P58771 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tpm1P58771 Gm37580-201ENSMUST00000192408 2800 ntBASIC13.33□□□□□ -0.28
Tpm1P58771 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Tpm1P58771 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm1P58771 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.33□□□□□ -0.28
Tpm1P58771 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tpm1P58771 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm1P58771 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.33□□□□□ -0.28
Tpm1P58771 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.33□□□□□ -0.28
Tpm1P58771 Gm12502-201ENSMUST00000120197 444 ntBASIC13.33□□□□□ -0.28
Tpm1P58771 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.33□□□□□ -0.28
Tpm1P58771 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.33□□□□□ -0.28
Tpm1P58771 Gm44405-201ENSMUST00000198952 126 ntBASIC13.33□□□□□ -0.28
Tpm1P58771 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm1P58771 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tpm1P58771 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.33□□□□□ -0.28
Tpm1P58771 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm1P58771 Gm5781-201ENSMUST00000219792 443 ntBASIC13.33□□□□□ -0.28
Tpm1P58771 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm1P58771 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.33□□□□□ -0.28
Tpm1P58771 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.33□□□□□ -0.28
Tpm1P58771 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tpm1P58771 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tpm1P58771 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tpm1P58771 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tpm1P58771 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.33□□□□□ -0.28
Tpm1P58771 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm1P58771 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm1P58771 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tpm1P58771 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm1P58771 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.33□□□□□ -0.28
Tpm1P58771 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm1P58771 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tpm1P58771 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tpm1P58771 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.33□□□□□ -0.28
Tpm1P58771 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tpm1P58771 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm1P58771 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.33□□□□□ -0.28
Tpm1P58771 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tpm1P58771 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Tpm1P58771 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tpm1P58771 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC13.32□□□□□ -0.28
Tpm1P58771 Gm23912-201ENSMUST00000104687 87 ntBASIC13.32□□□□□ -0.28
Tpm1P58771 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.32□□□□□ -0.28
Tpm1P58771 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Tpm1P58771 Gm7029-201ENSMUST00000173226 450 ntBASIC13.32□□□□□ -0.28
Tpm1P58771 Gm9002-201ENSMUST00000178437 499 ntBASIC13.32□□□□□ -0.28
Tpm1P58771 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Gm6745-201ENSMUST00000199216 526 ntBASIC13.32□□□□□ -0.28
Tpm1P58771 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.32□□□□□ -0.28
Tpm1P58771 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.32□□□□□ -0.28
Tpm1P58771 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.32□□□□□ -0.28
Tpm1P58771 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.32□□□□□ -0.28
Tpm1P58771 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.32□□□□□ -0.28
Tpm1P58771 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Gm10076-201ENSMUST00000073238 384 ntBASIC13.32□□□□□ -0.28
Tpm1P58771 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Tpm1P58771 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Tpm1P58771 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Gm37422-201ENSMUST00000193794 4718 ntBASIC13.32□□□□□ -0.28
Tpm1P58771 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Tpm1P58771 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm1P58771 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.31□□□□□ -0.28
Tpm1P58771 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.31□□□□□ -0.28
Tpm1P58771 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tpm1P58771 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms