Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.57□□□□□ -0.4
Rfx2P48379 Gm12380-201ENSMUST00000119012 544 ntBASIC12.57□□□□□ -0.4
Rfx2P48379 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Rfx2P48379 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.57□□□□□ -0.4
Rfx2P48379 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.57□□□□□ -0.4
Rfx2P48379 Mir7677-201ENSMUST00000184226 67 ntBASIC12.57□□□□□ -0.4
Rfx2P48379 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.57□□□□□ -0.4
Rfx2P48379 Gm7848-201ENSMUST00000210739 718 ntBASIC12.57□□□□□ -0.4
Rfx2P48379 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.57□□□□□ -0.4
Rfx2P48379 Gm8959-201ENSMUST00000213150 571 ntBASIC12.57□□□□□ -0.4
Rfx2P48379 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.57□□□□□ -0.4
Rfx2P48379 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.57□□□□□ -0.4
Rfx2P48379 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.57□□□□□ -0.4
Rfx2P48379 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.57□□□□□ -0.4
Rfx2P48379 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Rfx2P48379 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Rfx2P48379 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rfx2P48379 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.56□□□□□ -0.4
Rfx2P48379 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.56□□□□□ -0.4
Rfx2P48379 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rfx2P48379 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Rfx2P48379 Gm9062-201ENSMUST00000117712 727 ntBASIC12.56□□□□□ -0.4
Rfx2P48379 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.56□□□□□ -0.4
Rfx2P48379 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.56□□□□□ -0.4
Rfx2P48379 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.56□□□□□ -0.4
Rfx2P48379 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Gm17827-201ENSMUST00000211825 742 ntBASIC12.56□□□□□ -0.4
Rfx2P48379 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.56□□□□□ -0.4
Rfx2P48379 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.56□□□□□ -0.4
Rfx2P48379 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rfx2P48379 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.56□□□□□ -0.4
Rfx2P48379 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.56□□□□□ -0.4
Rfx2P48379 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Rfx2P48379 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx2P48379 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.55□□□□□ -0.4
Rfx2P48379 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.55□□□□□ -0.4
Rfx2P48379 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rfx2P48379 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.55□□□□□ -0.4
Rfx2P48379 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rfx2P48379 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.55□□□□□ -0.4
Rfx2P48379 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.55□□□□□ -0.4
Rfx2P48379 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.55□□□□□ -0.4
Rfx2P48379 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.55□□□□□ -0.4
Rfx2P48379 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.55□□□□□ -0.4
Rfx2P48379 Gm42599-201ENSMUST00000201308 469 ntBASIC12.55□□□□□ -0.4
Rfx2P48379 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms