Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
Xcl1P47993 Gm37447-201ENSMUST00000195625 2928 ntBASIC7.69□□□□□ -1.18
Xcl1P47993 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Xcl1P47993 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
Xcl1P47993 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC7.69□□□□□ -1.18
Xcl1P47993 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Xcl1P47993 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC7.69□□□□□ -1.18
Xcl1P47993 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Xcl1P47993 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Xcl1P47993 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
Xcl1P47993 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Xcl1P47993 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Xcl1P47993 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC7.69□□□□□ -1.18
Xcl1P47993 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC7.69□□□□□ -1.18
Xcl1P47993 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Xcl1P47993 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Xcl1P47993 Slco5a1-207ENSMUST00000188454 8463 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
Xcl1P47993 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Xcl1P47993 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC7.69□□□□□ -1.18
Xcl1P47993 Zbtb43-201ENSMUST00000028125 4998 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Xcl1P47993 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Xcl1P47993 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC7.69□□□□□ -1.18
Xcl1P47993 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
Xcl1P47993 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Ttc28-206ENSMUST00000156290 10688 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Xcl1P47993 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Xcl1P47993 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Xcl1P47993 Rassf2-202ENSMUST00000103182 4589 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Xcl1P47993 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC7.68□□□□□ -1.18
Xcl1P47993 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Xcl1P47993 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Cntrl-206ENSMUST00000113037 5970 ntTSL 5 BASIC7.68□□□□□ -1.18
Xcl1P47993 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Xcl1P47993 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Xcl1P47993 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC7.68□□□□□ -1.18
Xcl1P47993 Gm15393-201ENSMUST00000120499 219 ntBASIC7.68□□□□□ -1.18
Xcl1P47993 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC7.68□□□□□ -1.18
Xcl1P47993 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
Xcl1P47993 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC7.68□□□□□ -1.18
Xcl1P47993 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC7.68□□□□□ -1.18
Xcl1P47993 Gm27357-201ENSMUST00000183754 135 ntBASIC7.68□□□□□ -1.18
Xcl1P47993 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC7.68□□□□□ -1.18
Xcl1P47993 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC7.68□□□□□ -1.18
Xcl1P47993 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Gm43372-201ENSMUST00000202662 3016 ntBASIC7.68□□□□□ -1.18
Xcl1P47993 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Xcl1P47993 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Gm43636-201ENSMUST00000201501 2235 ntBASIC7.68□□□□□ -1.18
Xcl1P47993 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Itga10-202ENSMUST00000119365 5035 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Gm6714-201ENSMUST00000218677 2330 ntBASIC7.68□□□□□ -1.18
Xcl1P47993 Itgam-201ENSMUST00000064821 4682 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Xcl1P47993 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC7.68□□□□□ -1.18
Xcl1P47993 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC7.68□□□□□ -1.18
Xcl1P47993 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Trio-210ENSMUST00000227337 6375 ntBASIC7.68□□□□□ -1.18
Xcl1P47993 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Xcl1P47993 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Xcl1P47993 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Xcl1P47993 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.18
Xcl1P47993 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Xcl1P47993 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Xcl1P47993 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Xcl1P47993 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms