Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.62□□□□□ -0.87
Cd27P41272 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cd27P41272 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC9.62□□□□□ -0.87
Cd27P41272 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cd27P41272 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cd27P41272 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cd27P41272 Gm37324-201ENSMUST00000194500 4504 ntBASIC9.62□□□□□ -0.87
Cd27P41272 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cd27P41272 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cd27P41272 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cd27P41272 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cd27P41272 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.62□□□□□ -0.87
Cd27P41272 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
Cd27P41272 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC9.62□□□□□ -0.87
Cd27P41272 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Cd27P41272 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.61□□□□□ -0.87
Cd27P41272 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC9.61□□□□□ -0.87
Cd27P41272 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.61□□□□□ -0.87
Cd27P41272 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Gm44806-201ENSMUST00000205574 2303 ntBASIC9.61□□□□□ -0.87
Cd27P41272 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Cd27P41272 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Cd27P41272 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Cd27P41272 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.61□□□□□ -0.87
Cd27P41272 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Cd27P41272 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Cd27P41272 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Cd27P41272 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Cd27P41272 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Gm22133-201ENSMUST00000102082 109 ntBASIC9.61□□□□□ -0.87
Cd27P41272 Gm23949-201ENSMUST00000104027 127 ntBASIC9.61□□□□□ -0.87
Cd27P41272 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Gm15711-201ENSMUST00000118889 535 ntBASIC9.61□□□□□ -0.87
Cd27P41272 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC9.61□□□□□ -0.87
Cd27P41272 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Cd27P41272 Mir7070-201ENSMUST00000183657 86 ntBASIC9.61□□□□□ -0.87
Cd27P41272 Gstp-ps-201ENSMUST00000195526 631 ntBASIC9.61□□□□□ -0.87
Cd27P41272 Gm8956-201ENSMUST00000203939 825 ntBASIC9.61□□□□□ -0.87
Cd27P41272 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
Cd27P41272 Gm17827-201ENSMUST00000211825 742 ntBASIC9.61□□□□□ -0.87
Cd27P41272 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.61□□□□□ -0.87
Cd27P41272 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Cd27P41272 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Cd27P41272 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC9.61□□□□□ -0.87
Cd27P41272 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Cd27P41272 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.61□□□□□ -0.87
Cd27P41272 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Cd27P41272 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC9.61□□□□□ -0.87
Cd27P41272 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Cd27P41272 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cd27P41272 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cd27P41272 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cd27P41272 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cd27P41272 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC9.6□□□□□ -0.87
Cd27P41272 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cd27P41272 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cd27P41272 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cd27P41272 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cd27P41272 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Cd27P41272 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cd27P41272 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cd27P41272 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.6□□□□□ -0.87
Cd27P41272 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cd27P41272 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cd27P41272 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cd27P41272 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC9.6□□□□□ -0.87
Cd27P41272 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cd27P41272 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cd27P41272 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cd27P41272 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cd27P41272 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cd27P41272 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Cd27P41272 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms