Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Sftpa1P35242 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Mir6407-201ENSMUST00000184510 101 ntBASIC11.06□□□□□ -0.64
Sftpa1P35242 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sftpa1P35242 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Gm44506-201ENSMUST00000206278 965 ntBASIC11.06□□□□□ -0.64
Sftpa1P35242 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.06□□□□□ -0.64
Sftpa1P35242 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.06□□□□□ -0.64
Sftpa1P35242 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Sftpa1P35242 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.06□□□□□ -0.64
Sftpa1P35242 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sftpa1P35242 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Sftpa1P35242 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sftpa1P35242 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.05□□□□□ -0.64
Sftpa1P35242 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sftpa1P35242 Gm14942-201ENSMUST00000119642 336 ntBASIC11.05□□□□□ -0.64
Sftpa1P35242 Gm13022-201ENSMUST00000121181 285 ntBASIC11.05□□□□□ -0.64
Sftpa1P35242 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.05□□□□□ -0.64
Sftpa1P35242 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sftpa1P35242 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Gm3150-201ENSMUST00000166418 204 ntBASIC11.05□□□□□ -0.64
Sftpa1P35242 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sftpa1P35242 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sftpa1P35242 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.05□□□□□ -0.64
Sftpa1P35242 Gm12407-201ENSMUST00000180219 324 ntBASIC11.05□□□□□ -0.64
Sftpa1P35242 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC11.05□□□□□ -0.64
Sftpa1P35242 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.05□□□□□ -0.64
Sftpa1P35242 Gm43778-201ENSMUST00000199438 199 ntBASIC11.05□□□□□ -0.64
Sftpa1P35242 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.05□□□□□ -0.64
Sftpa1P35242 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Mt1-202ENSMUST00000211807 1085 ntBASIC11.05□□□□□ -0.64
Sftpa1P35242 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sftpa1P35242 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.05□□□□□ -0.64
Sftpa1P35242 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.05□□□□□ -0.64
Sftpa1P35242 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Sftpa1P35242 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sftpa1P35242 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.05□□□□□ -0.64
Sftpa1P35242 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sftpa1P35242 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.05□□□□□ -0.64
Sftpa1P35242 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sftpa1P35242 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC11.05□□□□□ -0.64
Sftpa1P35242 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sftpa1P35242 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sftpa1P35242 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.04□□□□□ -0.64
Sftpa1P35242 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sftpa1P35242 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sftpa1P35242 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.04□□□□□ -0.64
Sftpa1P35242 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Sftpa1P35242 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sftpa1P35242 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Sftpa1P35242 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sftpa1P35242 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms