Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NgfP01139 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NgfP01139 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NgfP01139 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NgfP01139 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NgfP01139 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NgfP01139 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NgfP01139 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NgfP01139 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
NgfP01139 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.54□□□□□ -0.72
NgfP01139 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
NgfP01139 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
NgfP01139 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.54□□□□□ -0.72
NgfP01139 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.54□□□□□ -0.72
NgfP01139 Gm14441-201ENSMUST00000121960 540 ntBASIC10.54□□□□□ -0.72
NgfP01139 Gm16397-201ENSMUST00000122201 494 ntBASIC10.54□□□□□ -0.72
NgfP01139 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC10.54□□□□□ -0.72
NgfP01139 Mir1956-201ENSMUST00000157748 65 ntBASIC10.54□□□□□ -0.72
NgfP01139 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC10.54□□□□□ -0.72
NgfP01139 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC10.54□□□□□ -0.72
NgfP01139 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
NgfP01139 Gm8492-201ENSMUST00000182375 987 ntBASIC10.54□□□□□ -0.72
NgfP01139 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.54□□□□□ -0.72
NgfP01139 Gm28388-201ENSMUST00000186262 437 ntBASIC10.54□□□□□ -0.72
NgfP01139 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC10.54□□□□□ -0.72
NgfP01139 Gm37981-201ENSMUST00000194280 535 ntBASIC10.54□□□□□ -0.72
NgfP01139 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Gm8342-201ENSMUST00000209839 757 ntBASIC10.54□□□□□ -0.72
NgfP01139 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC10.54□□□□□ -0.72
NgfP01139 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.54□□□□□ -0.72
NgfP01139 CT025553.1-201ENSMUST00000226292 299 ntBASIC10.54□□□□□ -0.72
NgfP01139 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
NgfP01139 Map1b-203ENSMUST00000223725 2669 ntBASIC10.54□□□□□ -0.72
NgfP01139 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
NgfP01139 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.54□□□□□ -0.72
NgfP01139 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.54□□□□□ -0.72
NgfP01139 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
NgfP01139 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.53□□□□□ -0.72
NgfP01139 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
NgfP01139 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
NgfP01139 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
NgfP01139 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
NgfP01139 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
NgfP01139 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
NgfP01139 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.53□□□□□ -0.72
NgfP01139 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
NgfP01139 Gm23272-201ENSMUST00000104053 129 ntBASIC10.53□□□□□ -0.72
NgfP01139 Gm26013-201ENSMUST00000104404 119 ntBASIC10.53□□□□□ -0.72
NgfP01139 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NgfP01139 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC10.53□□□□□ -0.72
NgfP01139 Gm9089-201ENSMUST00000122027 526 ntBASIC10.53□□□□□ -0.72
NgfP01139 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC10.53□□□□□ -0.72
NgfP01139 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms