Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Vti1aO89116 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.94□□□□□ -0.34
Vti1aO89116 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC12.94□□□□□ -0.34
Vti1aO89116 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.94□□□□□ -0.34
Vti1aO89116 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1aO89116 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.94□□□□□ -0.34
Vti1aO89116 Gm44882-201ENSMUST00000205702 802 ntBASIC12.94□□□□□ -0.34
Vti1aO89116 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1aO89116 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1aO89116 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1aO89116 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1aO89116 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1aO89116 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1aO89116 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1aO89116 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.94□□□□□ -0.34
Vti1aO89116 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1aO89116 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Vti1aO89116 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1aO89116 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1aO89116 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1aO89116 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1aO89116 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1aO89116 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.93□□□□□ -0.34
Vti1aO89116 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Vti1aO89116 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.93□□□□□ -0.34
Vti1aO89116 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.93□□□□□ -0.34
Vti1aO89116 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vti1aO89116 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.93□□□□□ -0.34
Vti1aO89116 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vti1aO89116 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Vti1aO89116 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.93□□□□□ -0.34
Vti1aO89116 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.93□□□□□ -0.34
Vti1aO89116 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.93□□□□□ -0.34
Vti1aO89116 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Vti1aO89116 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.93□□□□□ -0.34
Vti1aO89116 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.93□□□□□ -0.34
Vti1aO89116 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.93□□□□□ -0.34
Vti1aO89116 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Gm5051-201ENSMUST00000204085 485 ntBASIC12.93□□□□□ -0.34
Vti1aO89116 Gm44126-201ENSMUST00000204831 514 ntBASIC12.93□□□□□ -0.34
Vti1aO89116 Gm19994-201ENSMUST00000217086 586 ntBASIC12.93□□□□□ -0.34
Vti1aO89116 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.93□□□□□ -0.34
Vti1aO89116 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.93□□□□□ -0.34
Vti1aO89116 Gm270-201ENSMUST00000223010 976 ntBASIC12.93□□□□□ -0.34
Vti1aO89116 Gm807-202ENSMUST00000224929 408 ntBASIC12.93□□□□□ -0.34
Vti1aO89116 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Gm26448-201ENSMUST00000082446 203 ntBASIC12.93□□□□□ -0.34
Vti1aO89116 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.93□□□□□ -0.34
Vti1aO89116 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.93□□□□□ -0.34
Vti1aO89116 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Vti1aO89116 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.93□□□□□ -0.34
Vti1aO89116 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vti1aO89116 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Vti1aO89116 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1aO89116 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.92□□□□□ -0.34
Vti1aO89116 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.92□□□□□ -0.34
Vti1aO89116 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.92□□□□□ -0.34
Vti1aO89116 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Vti1aO89116 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1aO89116 Gm12196-201ENSMUST00000120954 262 ntBASIC12.92□□□□□ -0.34
Vti1aO89116 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 138.1 ms